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  "Package": "pigauto",
  "Title": "Fill in Missing Species Traits Using a Phylogenetic Tree",
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  "Authors@R": "person(\"Shinichi\", \"Nakagawa\", role = c(\"aut\", \"cre\"), email = \"itchyshin@gmail.com\")",
  "Description": "Imputes missing species trait data for comparative\nanalyses by combining three sources of information:\nphylogenetic similarity (closely related species share similar\ntraits), cross-trait correlations (observed traits inform\nmissing ones), and optional environmental covariates (climate,\nhabitat, geography). Handles continuous measurements, counts,\nbinary variables, ordered categories, unordered categories,\nbounded proportions, zero-inflated counts, and compositional\nmulti-proportion data in a single call. The method blends a\nphylogenetic baseline with a graph neural network correction; a\nper-trait gate calibrated on held-out data ensures the network\nonly contributes when it improves on the baseline. Provides\nconformal prediction intervals (95% coverage) for continuous,\ncount, and ordinal traits and supports Rubin's-rules multiple\nimputation for downstream inference, including tree-uncertainty\npropagation via posterior tree samples. Tested up to 10,000\nspecies. Bundled datasets include a 300-species and a\n9,993-species AVONET bird trait + BirdTree phylogeny subset.",
  "License": "MIT + file LICENSE",
  "URL": "https://itchyshin.github.io/pigauto,\nhttps://github.com/itchyshin/pigauto",
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      "page": "pool_mi",
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    {
      "page": "predict.pigauto_fit",
      "title": "Impute missing traits using a fitted pigauto model",
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      "topics": [
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    {
      "page": "pull_gbif_centroids",
      "title": "Fetch species range-centroid covariates from GBIF",
      "topics": [
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      "page": "pull_worldclim_per_species",
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      "page": "read_traits",
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      "topics": [
        "read_traits"
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      "title": "Read a phylogenetic tree from a file",
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    {
      "page": "save_pigauto",
      "title": "Save a fitted pigauto model",
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      "page": "tree300",
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      "topics": [
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    },
    {
      "page": "trees300",
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      "topics": [
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    {
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